{
  "_id": "6a102de8acfb0bcc41c9407a",
  "Package": "SEset",
  "Type": "Package",
  "Title": "Computing Statistically-Equivalent Path Models",
  "Version": "1.0.1",
  "Author": "Oisín Ryan",
  "Maintainer": "Oisín Ryan <o.ryan@uu.nl>",
  "Description": "Tools to compute and analyze the set of\nstatistically-equivalent (Gaussian, linear) path models which\ngenerate the input precision or (partial) correlation matrix.\nThis procedure is useful for understanding how statistical\nnetwork models such as the Gaussian Graphical Model (GGM)\nperform as causal discovery tools. The statistical-equivalence\nset of a given GGM expresses the uncertainty we have about the\nsign, size and direction of directed relationships based on the\nweights matrix of the GGM alone. The derivation of the\nequivalence set and its use for understanding GGMs as causal\ndiscovery tools is described by Ryan, O., Bringmann, L.F., &\nSchuurman, N.K. (2022) <doi: 10.31234/osf.io/ryg69>.",
  "BugReports": "https://github.com/ryanoisin/SEset",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RdMacros": "Rdpack",
  "RoxygenNote": "7.1.1",
  "Repository": "https://ryanoisin.r-universe.dev",
  "Date/Publication": "2023-01-19 15:33:25 UTC",
  "RemoteUrl": "https://github.com/ryanoisin/seset",
  "RemoteRef": "HEAD",
  "RemoteSha": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-13 05:33:43 UTC",
    "User": "root"
  },
  "MD5sum": "ae59a6cd9031971ea09da49c286cbc5b",
  "_user": "ryanoisin",
  "_type": "src",
  "_file": "SEset_1.0.1.tar.gz",
  "_fileid": "8c710edc2e1f7ed7b033c6d6aeea7829a2d8b2eefbbca6a5245ebfe985c7872f",
  "_filesize": 243841,
  "_sha256": "8c710edc2e1f7ed7b033c6d6aeea7829a2d8b2eefbbca6a5245ebfe985c7872f",
  "_created": "2026-05-13T05:33:43.000Z",
  "_published": "2026-05-22T10:20:24.246Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77360592281,
      "time": 127,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6962383298"
    },
    {
      "job": 77360592317,
      "time": 127,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6962382252"
    },
    {
      "job": 77360592315,
      "time": 168,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6962385868"
    },
    {
      "job": 77360592348,
      "time": 144,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6962379453"
    },
    {
      "job": 77360591753,
      "time": 168,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6962355791"
    },
    {
      "job": 77360591847,
      "time": 106,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7158207070"
    },
    {
      "job": 77360592408,
      "time": 72,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6962370904"
    },
    {
      "job": 77360592300,
      "time": 135,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6962383569"
    },
    {
      "job": 77360592386,
      "time": 118,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6962380077"
    }
  ],
  "_buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/ryanoisin/seset",
  "_commit": {
    "id": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
    "author": "ryanoisin <ryanoisin@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Update README.md",
    "time": 1674142405
  },
  "_maintainer": {
    "name": "Oisín Ryan",
    "email": "o.ryan@uu.nl"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "combinat",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "Rdpack",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "qgraph",
      "role": "Suggests"
    }
  ],
  "_owner": "ryanoisin",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "ryanoisin",
      "count": 33,
      "uuid": 19952460
    }
  ],
  "_userbio": {
    "uuid": 19952460,
    "type": "user",
    "name": "ryanoisin"
  },
  "_downloads": {
    "count": 219,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SEset"
  },
  "_devurl": "https://github.com/ryanoisin/seset",
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/SEset.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/ryanoisin/seset",
  "_realowner": "ryanoisin",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.1",
      "date": "2022-03-17"
    }
  ],
  "_exports": [
    "cov_to_path",
    "find_parents",
    "get_psi",
    "network_to_path",
    "network_to_SEset",
    "order_gen",
    "path_to_network",
    "propcal",
    "r2_distribution",
    "reorder_mat",
    "SEset_to_network"
  ],
  "_datasets": [
    {
      "name": "riskcor",
      "title": "Cognitive risk sample correlation matrix",
      "object": "riskcor",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "BRIEF_WM",
        "PASAT_ACC",
        "Adapt ER",
        "Maladapt ER",
        "Resilience",
        "Resid Depress"
      ],
      "rows": 6,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "cov_to_path",
      "title": "Path model from covariance matrix with ordering",
      "topics": [
        "cov_to_path"
      ]
    },
    {
      "page": "find_parents",
      "title": "Return parent indices from a (weighted) DAG for a given child",
      "topics": [
        "find_parents"
      ]
    },
    {
      "page": "get_psi",
      "title": "Calculate residual-covariance matrix based on a path model and covariance matrix",
      "topics": [
        "get_psi"
      ]
    },
    {
      "page": "network_to_path",
      "title": "Path model from ordered precision matrix",
      "topics": [
        "network_to_path"
      ]
    },
    {
      "page": "network_to_SEset",
      "title": "SE-set from precision matrix",
      "topics": [
        "network_to_SEset"
      ]
    },
    {
      "page": "order_gen",
      "title": "Generate all topological orderings",
      "topics": [
        "order_gen"
      ]
    },
    {
      "page": "path_to_network",
      "title": "Precision matrix from ordered path model",
      "topics": [
        "path_to_network"
      ]
    },
    {
      "page": "propcal",
      "title": "Edge frequency in the SE-set",
      "topics": [
        "propcal"
      ]
    },
    {
      "page": "r2_distribution",
      "title": "Compute Controllability Distribution in the SE-set",
      "topics": [
        "r2_distribution"
      ]
    },
    {
      "page": "reorder_mat",
      "title": "Re-order rows and columns",
      "topics": [
        "reorder_mat"
      ]
    },
    {
      "page": "riskcor",
      "title": "Cognitive risk sample correlation matrix",
      "topics": [
        "riskcor"
      ]
    },
    {
      "page": "SEset_to_network",
      "title": "Precision matrices from the SEset",
      "topics": [
        "SEset_to_network"
      ]
    }
  ],
  "_readme": "https://github.com/ryanoisin/seset/raw/HEAD/README.md",
  "_rundeps": [
    "combinat",
    "lattice",
    "Matrix",
    "rbibutils",
    "Rdpack"
  ],
  "_score": 3,
  "_indexed": true,
  "_nocasepkg": "seset",
  "_universes": [
    "ryanoisin"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.1",
      "date": "2026-05-13T05:35:57.000Z",
      "distro": "noble",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "8377bc6cb9405ed8852a4424609252d1c7462e5d24c2d77d21264535c57fd661",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.1",
      "date": "2026-05-13T05:35:51.000Z",
      "distro": "noble",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "bc017229eabc80b8f18c848b9cc67188a6841fea1d64d76bdb226d6fe703b9c7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.1",
      "date": "2026-05-13T05:36:14.000Z",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "924b716b23373a9d88cf44ac5992c3b78581ef8f8e5f35b65d9cb46a275173bd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.1",
      "date": "2026-05-13T05:35:41.000Z",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "b38306c1c572c9ad946a9b85167fd445602f6b6261c4cf7ab8a10c12bb2bcdaf",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.1",
      "date": "2026-05-13T05:34:53.000Z",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "e48924354d4cbb0705f310519328be6fc6c1bf8b3e3ac6a7d52e5c7af25f5fc2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.1",
      "date": "2026-05-13T05:35:56.000Z",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "28b52d411ede64e6948e4f1cf8620836f2b0126d77156e81bf4333bd622efb8a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.1",
      "date": "2026-05-13T05:35:38.000Z",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "18b64783c260f83376bb5ea75c7578841096e914abdcd0ff7413be10b43017af",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.1",
      "date": "2026-05-22T10:20:10.000Z",
      "commit": "3d93eb9c3218ab25cc47bf90b94dd53135feff45",
      "fileid": "c8a36154cdfbe377206dc21d74daf7eba22bce34f19c678c48b07e64f7a12ef4",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ryanoisin/actions/runs/25780353061"
    }
  ]
}